| distance | reference number | name | latitude | longitude |
| 3.9 | 2230 | Petaluma River entrance, San Pablo Bay, California | 38.1117 | -122.498 |
| 4.5 | 1289 | Hog Island, San Antonio Creek, San Pablo Bay, Calif | 38.1567 | -122.55 |
| 5.1 | 1067 | Gallinas Creek, San Pablo Bay, California | 38.015 | -122.503 |
| 7.1 | 1588 | Lakeville, Petaluma River, San Pablo Bay, Californi | 38.2 | -122.567 |
| 8.6 | 2328 | Point San Pedro, San Pablo Bay, California | 37.99 | -122.447 |
| 8.7 | 652 | Corte Madera Creek, San Francisco Bay, California | 37.9433 | -122.513 |
| 9.6 | 2329 | Point San Quentin, San Francisco Bay, California | 37.945 | -122.473 |
| 9.8 | 3186 | Upper drawbridge, Petaluma River, San Pablo Bay, Ca | 38.2333 | -122.617 |
| 10.0 | 2851 | Sonoma Creek, San Pablo Bay, California | 38.1567 | -122.407 |
| 10.1 | 2323 | Point Orient, San Francisco Bay, California | 37.9667 | -122.433 |
| 10.9 | 3370 | Wingo, Sonoma Creek, San Pablo Bay, California | 38.2167 | -122.433 |
| 12.0 | 2269 | Pinole Point, San Pablo Bay, California | 38.0167 | -122.367 |
| 12.8 | 300 | Bolinas Lagoon, California | 37.91 | -122.682 |
| 13.2 | 548 | Chevron Oil Company Pier, Richmond, California | 37.9283 | -122.4 |
| 13.2 | 2540 | Richmond, Chevron Oil Pier, California | 37.9283 | -122.4 |
| 13.3 | 2302 | Point Chauncey, San Francisco Bay, California | 37.8917 | -122.443 |
| 13.6 | 2687 | Sausalito, Corps of Engineers Dock, San Francisco B | 37.865 | -122.493 |
| 14.4 | 69 | Angel Island (west side), San Francisco Bay, Califo | 37.8667 | -122.45 |
| 14.6 | 2686 | Sausalito, California | 37.85 | -122.483 |
| 15.5 | 70 | Angel Island, East Garrison, San Francisco Bay, Cal | 37.8633 | -122.418 |
| 15.7 | 2538 | Richmond Inner Harbor, San Francisco Bay, Californi | 37.91 | -122.358 |
| 16.0 | 878 | Edgerley Island, Napa River, Carquinez Strait, Cali | 38.1933 | -122.313 |
| 16.0 | 2298 | Point Bonita, Bonita Cove, San Francisco Bay, Calif | 37.8167 | -122.533 |
| 16.2 | 1258 | Hercules, Refugio Landing, San Pablo Bay, Californi | 38.0233 | -122.292 |
| 16.9 | 329 | Brazos Drawbridge, Napa River, Carquinez Strait, Ca | 38.2083 | -122.303 |